Browsing by Author "Freitas, Rui"
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- Historical separation and present-day structure of common dolphinfish (Coryphaena hippurus) populations in the Atlantic Ocean and Mediterranean SeaPublication . Maggio, Teresa; Allegra, Alessandro; Andaloro, Franco; Barreiros, João Pedro; Battaglia, Pietro; Butler, Christopher M; Cuttitta, Angela; Fontes, Miguel Rodrigues Jorge; Freitas, Rui; Gatt, Mark; Karakulak, F Saadet; Macias, David; Nicosia, Aldo; Oxenford, Hazel A; Saber, Samar; Yildiz, Taner; Sinopoli, Mauro; Vasco Rodrigues, Nuno; Grant, W StewartThe common dolphinfish (Coryphaena hippurus) is an epipelagic, mid-trophic level, highly migratory species distributed throughout the world’s tropical and subtropical oceans in waters greater than 20C. Life-history variables, migratory behaviour, and genetic markers have been used to define major stocks in the central Atlantic Ocean and Mediterranean Sea. Here, we used the mitochondrial DNA gene NADH subunit 1 (688 bp) to test for differences between population groups. A total of 103 haplotypes were detected among 203 fish. Gene diversities in samples were large and similar among populations (mean h ¼ 0.932; range 0.894–0.987), but nucleotide diversities varied widely among samples (range p ¼ 0.004–0.034) and appear to reflect population histories. Principal component analysis revealed two large populations groups, and the analysis of molecular variation and pairwise values of UST resolved population structure within these groups. Populations in the eastern Atlantic and Mediterranean showed the largest amounts of divergence from one another (UCT ¼ 0.331). Adult movement and biophysical barriers to larval dispersal may explain contemporary differences between stocks, but the divergent populations in the Mediterranean Sea are likely due to isolations by cold temperature barriers during Pleistocene glaciations. The geographically large stock groupings require international cooperation in the harvest management and conservation of local dolphinfish population
- Niche and neutral assembly mechanisms contribute to latitudinal diversity gradients in reef fishesPublication . Bosch, Nestor E.; Wernberg, Thomas; Langlois, Tim J.; Smale, Dan A.; Moore, Pippa J.; Franco, João N.; Thiriet, Pierre; Feunteun, Eric; Ribeiro, Cláudia; Neves, Pedro; Freitas, Rui; Filbee-Dexter, Karen; Norderhaug, Kjell Magnus; Garcia, Alvaro; Otero-Ferrer, Francisco; Espino, Fernando; Haroun, Ricardo; Lazzari, Natali; Tuya, FernandoAim: The influence of niche and neutral mechanisms on the assembly of ecological communities have long been debated. However, we still have a limited knowledge on their relative importance to explain patterns of diversity across latitudinal gradients (LDG). Here, we investigate the extent to which these ecological mechanisms contribute to the LDG of reef fishes. Location: Eastern Atlantic Ocean. Taxon: Reef-associated ray-finned fishes. Methods: We combined abundance data across ~60° of latitude with functional trait data and phylogenetic trees. A null model approach was used to decouple the influence of taxonomic diversity (TD) on functional (FD) and phylogenetic (PD) diversity. Standardized effect sizes (SES FD and SES PD) were used to explore patterns of overdispersion, clustering and randomness. Information theoretic approaches were used to investigate the role of large-(temperature, geographic isolation, nitrate and net primary productivity) and local-scale (human population and depth) drivers. We further assessed the role of demographic stochasticity and its interaction with species trophic identity and dispersal capacity. Results: Taxonomic diversity peaked at ~15°–20° N, with a second mode of lower magnitude at ~45°N; a pattern that was predicted by temperature, geographic isolation and productivity. Tropical regions displayed a higher proportion of overdispersed assemblages, whilst clustering increased towards temperate regions. Phylogenetic and functional overdispersion were associated with warmer, productive and isolated regions. Demographic stochasticity also contributed largely to community assembly, independently of ecoregions, although variation was dependent on the trophic identity and body size of species. Main conclusions: Niche-based processes linking thermal and resource constraints to local coexistence mechanisms have contributed to the LDG in reef fishes. These processes do not act in isolation, stressing the importance of understanding interactions between deterministic and stochastic factors driving community structure in the face of rapid biodiversity change.
